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torch mesh intersect error

lamiastella | PRO | 01/09/21 12:40:25 AM UTC (Edited) | 0 ⭐ | 454 👁️ | Never ⏰ | []
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[13196:3149 0:2054] 08:38:15 Fri Jan 08 [mona@goku:pts/1 +1] ~/research/code/smplify-x/torch-mesh-isect
$ pip install .
Processing /home/mona/research/code/smplify-x/torch-mesh-isect
Requirement already satisfied: torch>=1.0.1 in /home/mona/venv/smplifyx/lib/python3.8/site-packages (from mesh-intersection==0.1.0) (1.7.1)
Requirement already satisfied: typing-extensions in /home/mona/venv/smplifyx/lib/python3.8/site-packages (from torch>=1.0.1->mesh-intersection==0.1.0) (3.7.4.3)
Requirement already satisfied: numpy in /home/mona/venv/smplifyx/lib/python3.8/site-packages (from torch>=1.0.1->mesh-intersection==0.1.0) (1.19.5)
Building wheels for collected packages: mesh-intersection
  Building wheel for mesh-intersection (setup.py) ... error
  ERROR: Command errored out with exit status 1:
   command: /home/mona/venv/smplifyx/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-req-build-ehn49jhf/setup.py'"'"'; __file__='"'"'/tmp/pip-req-build-ehn49jhf/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-5d2ubl5g
       cwd: /tmp/pip-req-build-ehn49jhf/
  Complete output (36 lines):
  running bdist_wheel
  /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/utils/cpp_extension.py:352: UserWarning: Attempted to use ninja as the BuildExtension backend but we could not find ninja.. Falling back to using the slow distutils backend.
    warnings.warn(msg.format('we could not find ninja.'))
  running build
  running build_py
  creating build
  creating build/lib.linux-x86_64-3.8
  creating build/lib.linux-x86_64-3.8/mesh_intersection
  copying mesh_intersection/bvh_search_tree.py -> build/lib.linux-x86_64-3.8/mesh_intersection
  copying mesh_intersection/filter_faces.py -> build/lib.linux-x86_64-3.8/mesh_intersection
  copying mesh_intersection/loss.py -> build/lib.linux-x86_64-3.8/mesh_intersection
  copying mesh_intersection/__init__.py -> build/lib.linux-x86_64-3.8/mesh_intersection
  running build_ext
  building 'bvh_cuda' extension
  creating build/temp.linux-x86_64-3.8
  creating build/temp.linux-x86_64-3.8/src
  x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/TH -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/THC -Iinclude -I/home/mona/NVIDIA_CUDA-11.2_Samples/common/inc/ -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/TH -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/THC -I/home/mona/venv/smplifyx/include -I/usr/include/python3.8 -c src/bvh.cpp -o build/temp.linux-x86_64-3.8/src/bvh.o -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE="_gcc" -DPYBIND11_STDLIB="_libstdcpp" -DPYBIND11_BUILD_ABI="_cxxabi1011" -DTORCH_EXTENSION_NAME=bvh_cuda -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
  In file included from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/ATen/Parallel.h:149,
                   from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/utils.h:3,
                   from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/nn/cloneable.h:5,
                   from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/nn.h:3,
                   from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/all.h:12,
                   from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/extension.h:4,
                   from src/bvh.cpp:18:
  /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/ATen/ParallelOpenMP.h:84: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
     84 | #pragma omp parallel for if ((end - begin) >= grain_size)
        |
  In file included from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/Device.h:3,
                   from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/python.h:8,
                   from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/extension.h:6,
                   from src/bvh.cpp:18:
  /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/python_headers.h:10:10: fatal error: Python.h: No such file or directory
     10 | #include <Python.h>
        |          ^~~~~~~~~~
  compilation terminated.
  error: command 'x86_64-linux-gnu-gcc' failed with exit status 1
  ----------------------------------------
  ERROR: Failed building wheel for mesh-intersection
  Running setup.py clean for mesh-intersection
Failed to build mesh-intersection
Installing collected packages: mesh-intersection
    Running setup.py install for mesh-intersection ... error
    ERROR: Command errored out with exit status 1:
     command: /home/mona/venv/smplifyx/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-req-build-ehn49jhf/setup.py'"'"'; __file__='"'"'/tmp/pip-req-build-ehn49jhf/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-46aixtki/install-record.txt --single-version-externally-managed --compile --install-headers /home/mona/venv/smplifyx/include/site/python3.8/mesh-intersection
         cwd: /tmp/pip-req-build-ehn49jhf/
    Complete output (36 lines):
    running install
    running build
    running build_py
    creating build
    creating build/lib.linux-x86_64-3.8
    creating build/lib.linux-x86_64-3.8/mesh_intersection
    copying mesh_intersection/bvh_search_tree.py -> build/lib.linux-x86_64-3.8/mesh_intersection
    copying mesh_intersection/filter_faces.py -> build/lib.linux-x86_64-3.8/mesh_intersection
    copying mesh_intersection/loss.py -> build/lib.linux-x86_64-3.8/mesh_intersection
    copying mesh_intersection/__init__.py -> build/lib.linux-x86_64-3.8/mesh_intersection
    running build_ext
    /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/utils/cpp_extension.py:352: UserWarning: Attempted to use ninja as the BuildExtension backend but we could not find ninja.. Falling back to using the slow distutils backend.
      warnings.warn(msg.format('we could not find ninja.'))
    building 'bvh_cuda' extension
    creating build/temp.linux-x86_64-3.8
    creating build/temp.linux-x86_64-3.8/src
    x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/TH -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/THC -Iinclude -I/home/mona/NVIDIA_CUDA-11.2_Samples/common/inc/ -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/TH -I/home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/THC -I/home/mona/venv/smplifyx/include -I/usr/include/python3.8 -c src/bvh.cpp -o build/temp.linux-x86_64-3.8/src/bvh.o -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE="_gcc" -DPYBIND11_STDLIB="_libstdcpp" -DPYBIND11_BUILD_ABI="_cxxabi1011" -DTORCH_EXTENSION_NAME=bvh_cuda -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
    In file included from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/ATen/Parallel.h:149,
                     from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/utils.h:3,
                     from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/nn/cloneable.h:5,
                     from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/nn.h:3,
                     from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/all.h:12,
                     from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/extension.h:4,
                     from src/bvh.cpp:18:
    /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/ATen/ParallelOpenMP.h:84: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
       84 | #pragma omp parallel for if ((end - begin) >= grain_size)
          |
    In file included from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/Device.h:3,
                     from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/python.h:8,
                     from /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/extension.h:6,
                     from src/bvh.cpp:18:
    /home/mona/venv/smplifyx/lib/python3.8/site-packages/torch/include/torch/csrc/python_headers.h:10:10: fatal error: Python.h: No such file or directory
       10 | #include <Python.h>
          |          ^~~~~~~~~~
    compilation terminated.
    error: command 'x86_64-linux-gnu-gcc' failed with exit status 1
    ----------------------------------------
ERROR: Command errored out with exit status 1: /home/mona/venv/smplifyx/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-req-build-ehn49jhf/setup.py'"'"'; __file__='"'"'/tmp/pip-req-build-ehn49jhf/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-46aixtki/install-record.txt --single-version-externally-managed --compile --install-headers /home/mona/venv/smplifyx/include/site/python3.8/mesh-intersection Check the logs for full command output.
 

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