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change your admin rank to this
note: it's important that the apostrophe be the last permission on the list. if you put it first this won't work
 
  Admin:
    default: false
    permissions:
    - vanish.standard
    - -vanish.joinvanished
    - -vanish.joinwithoutannounce
    - -vanish.hooks.dynmap.alwayshidden
    - '*'