$ pip install deeplabcut==2.2b8 Collecting deeplabcut==2.2b8 Downloading deeplabcut-2.2b8-py3-none-any.whl (663 kB) |████████████████████████████████| 663 kB 1.6 MB/s Requirement already satisfied: python-dateutil in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (2.8.1) Requirement already satisfied: ipython-genutils in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.2.0) Requirement already satisfied: statsmodels>=0.11 in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.11.1) Requirement already satisfied: numpy==1.16.4 in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (1.16.4) Requirement already satisfied: chardet in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (3.0.4) Collecting bayesian-optimization Downloading bayesian-optimization-1.2.0.tar.gz (14 kB) Requirement already satisfied: cython in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.29.21) Collecting numba==0.51.1 Downloading numba-0.51.1-cp37-cp37m-manylinux2014_x86_64.whl (3.1 MB) |████████████████████████████████| 3.1 MB 6.5 MB/s Requirement already satisfied: click in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (7.1.2) Requirement already satisfied: tables in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (3.6.1) Requirement already satisfied: scikit-learn in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.23.1) Requirement already satisfied: scikit-image in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.16.2) Collecting tensorpack==0.9.8 Downloading tensorpack-0.9.8-py2.py3-none-any.whl (288 kB) |████████████████████████████████| 288 kB 7.1 MB/s Requirement already satisfied: pyyaml in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (5.3.1) Requirement already satisfied: moviepy<=1.0.1 in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (1.0.1) Requirement already satisfied: imgaug in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.4.0) Requirement already satisfied: certifi in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (2020.6.20) Collecting opencv-python-headless Downloading opencv_python_headless-4.4.0.44-cp37-cp37m-manylinux2014_x86_64.whl (36.7 MB) |████████████████████████████████| 36.7 MB 52 kB/s Requirement already satisfied: easydict in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (1.9) Requirement already satisfied: wheel in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.34.2) Requirement already satisfied: ipython in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (7.16.1) Requirement already satisfied: tqdm in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (4.47.0) Collecting matplotlib==3.1.3 Downloading matplotlib-3.1.3-cp37-cp37m-manylinux1_x86_64.whl (13.1 MB) |████████████████████████████████| 13.1 MB 130 kB/s Requirement already satisfied: patsy in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.5.1) Requirement already satisfied: six in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (1.15.0) Collecting filterpy Downloading filterpy-1.4.5.zip (177 kB) |████████████████████████████████| 177 kB 9.4 MB/s Requirement already satisfied: intel-openmp in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (2020.0.133) Requirement already satisfied: requests in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (2.24.0) Requirement already satisfied: pandas>=1.0.1 in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (1.0.5) Requirement already satisfied: ruamel.yaml>=0.15.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.16.10) Requirement already satisfied: h5py in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (2.10.0) Requirement already satisfied: setuptools in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (49.2.0.post20200714) Collecting scipy>=1.4 Downloading scipy-1.5.2-cp37-cp37m-manylinux1_x86_64.whl (25.9 MB) |████████████████████████████████| 25.9 MB 13 kB/s Collecting llvmlite<0.35,>=0.34.0.dev0 Downloading llvmlite-0.34.0-cp37-cp37m-manylinux2010_x86_64.whl (24.6 MB) |████████████████████████████████| 24.6 MB 1.9 MB/s Requirement already satisfied: numexpr>=2.6.2 in /home/mona/anaconda3/lib/python3.7/site-packages (from tables->deeplabcut==2.2b8) (2.7.1) Requirement already satisfied: threadpoolctl>=2.0.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from scikit-learn->deeplabcut==2.2b8) (2.1.0) Requirement already satisfied: joblib>=0.11 in /home/mona/anaconda3/lib/python3.7/site-packages (from scikit-learn->deeplabcut==2.2b8) (0.16.0) Requirement already satisfied: pillow>=4.3.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from scikit-image->deeplabcut==2.2b8) (7.2.0) Requirement already satisfied: networkx>=2.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from scikit-image->deeplabcut==2.2b8) (2.4) Requirement already satisfied: imageio>=2.3.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from scikit-image->deeplabcut==2.2b8) (2.9.0) Requirement already satisfied: PyWavelets>=0.4.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from scikit-image->deeplabcut==2.2b8) (1.1.1) Requirement already satisfied: tabulate>=0.7.7 in /home/mona/anaconda3/lib/python3.7/site-packages (from tensorpack==0.9.8->deeplabcut==2.2b8) (0.8.7) Requirement already satisfied: termcolor>=1.1 in /home/mona/anaconda3/lib/python3.7/site-packages (from tensorpack==0.9.8->deeplabcut==2.2b8) (1.1.0) Requirement already satisfied: psutil>=5 in /home/mona/anaconda3/lib/python3.7/site-packages (from tensorpack==0.9.8->deeplabcut==2.2b8) (5.7.0) Requirement already satisfied: msgpack>=0.5.2 in /home/mona/anaconda3/lib/python3.7/site-packages (from tensorpack==0.9.8->deeplabcut==2.2b8) (1.0.0) Requirement already satisfied: msgpack-numpy>=0.4.4.2 in /home/mona/anaconda3/lib/python3.7/site-packages (from tensorpack==0.9.8->deeplabcut==2.2b8) (0.4.6.post0) Requirement already satisfied: pyzmq>=16 in /home/mona/anaconda3/lib/python3.7/site-packages (from tensorpack==0.9.8->deeplabcut==2.2b8) (19.0.1) Requirement already satisfied: decorator<5.0,>=4.0.2 in /home/mona/anaconda3/lib/python3.7/site-packages (from moviepy<=1.0.1->deeplabcut==2.2b8) (4.4.2) Requirement already satisfied: proglog<=1.0.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from moviepy<=1.0.1->deeplabcut==2.2b8) (0.1.9) Requirement already satisfied: imageio-ffmpeg>=0.2.0; python_version >= "3.4" in /home/mona/anaconda3/lib/python3.7/site-packages (from moviepy<=1.0.1->deeplabcut==2.2b8) (0.4.2) Requirement already satisfied: Shapely in /home/mona/anaconda3/lib/python3.7/site-packages (from imgaug->deeplabcut==2.2b8) (1.7.0) Requirement already satisfied: opencv-python in /home/mona/anaconda3/lib/python3.7/site-packages (from imgaug->deeplabcut==2.2b8) (3.4.9.33) Requirement already satisfied: pickleshare in /home/mona/anaconda3/lib/python3.7/site-packages (from ipython->deeplabcut==2.2b8) (0.7.5) Requirement already satisfied: pexpect; sys_platform != "win32" in /home/mona/anaconda3/lib/python3.7/site-packages (from ipython->deeplabcut==2.2b8) (4.8.0) Requirement already satisfied: backcall in /home/mona/anaconda3/lib/python3.7/site-packages (from ipython->deeplabcut==2.2b8) (0.2.0) Requirement already satisfied: traitlets>=4.2 in /home/mona/anaconda3/lib/python3.7/site-packages (from ipython->deeplabcut==2.2b8) (4.3.3) Requirement already satisfied: prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from ipython->deeplabcut==2.2b8) (3.0.5) Requirement already satisfied: pygments in /home/mona/anaconda3/lib/python3.7/site-packages (from ipython->deeplabcut==2.2b8) (2.6.1) Requirement already satisfied: jedi>=0.10 in /home/mona/anaconda3/lib/python3.7/site-packages (from ipython->deeplabcut==2.2b8) (0.17.1) Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 in /home/mona/anaconda3/lib/python3.7/site-packages (from matplotlib==3.1.3->deeplabcut==2.2b8) (2.4.7) Requirement already satisfied: kiwisolver>=1.0.1 in /home/mona/anaconda3/lib/python3.7/site-packages (from matplotlib==3.1.3->deeplabcut==2.2b8) (1.2.0) Requirement already satisfied: cycler>=0.10 in /home/mona/anaconda3/lib/python3.7/site-packages (from matplotlib==3.1.3->deeplabcut==2.2b8) (0.10.0) Requirement already satisfied: idna<3,>=2.5 in /home/mona/anaconda3/lib/python3.7/site-packages (from requests->deeplabcut==2.2b8) (2.10) Requirement already satisfied: urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 in /home/mona/anaconda3/lib/python3.7/site-packages (from requests->deeplabcut==2.2b8) (1.25.9) Requirement already satisfied: pytz>=2017.2 in /home/mona/anaconda3/lib/python3.7/site-packages (from pandas>=1.0.1->deeplabcut==2.2b8) (2020.1) Requirement already satisfied: ruamel.yaml.clib>=0.1.2; platform_python_implementation == "CPython" and python_version < "3.9" in /home/mona/anaconda3/lib/python3.7/site-packages (from ruamel.yaml>=0.15.0->deeplabcut==2.2b8) (0.2.0) Requirement already satisfied: ptyprocess>=0.5 in /home/mona/anaconda3/lib/python3.7/site-packages (from pexpect; sys_platform != "win32"->ipython->deeplabcut==2.2b8) (0.6.0) Requirement already satisfied: wcwidth in /home/mona/anaconda3/lib/python3.7/site-packages (from prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0->ipython->deeplabcut==2.2b8) (0.2.5) Requirement already satisfied: parso<0.8.0,>=0.7.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from jedi>=0.10->ipython->deeplabcut==2.2b8) (0.7.0) Building wheels for collected packages: bayesian-optimization, filterpy Building wheel for bayesian-optimization (setup.py) ... done Created wheel for bayesian-optimization: filename=bayesian_optimization-1.2.0-py3-none-any.whl size=11684 sha256=6c410423c4f3130a19c09deb0f81349b8501f153b4dea28ecf62a2a41079c9cf Stored in directory: /home/mona/.cache/pip/wheels/fd/9b/71/f127d694e02eb40bcf18c7ae9613b88a6be4470f57a8528c5b Building wheel for filterpy (setup.py) ... done Created wheel for filterpy: filename=filterpy-1.4.5-py3-none-any.whl size=110449 sha256=785ee2a37bc77a137115136b57c55f8649675ea60c45255fa75853cead706d3f Stored in directory: /home/mona/.cache/pip/wheels/ce/e0/ee/a2b3c5caab3418c1ccd8c4de573d4cbe13315d7e8b0a55fbc2 Successfully built bayesian-optimization filterpy Installing collected packages: scipy, bayesian-optimization, llvmlite, numba, tensorpack, opencv-python-headless, matplotlib, filterpy, deeplabcut Attempting uninstall: scipy Found existing installation: scipy 1.1.0 Uninstalling scipy-1.1.0: Successfully uninstalled scipy-1.1.0 Attempting uninstall: llvmlite Found existing installation: llvmlite 0.33.0+1.g022ab0f ERROR: Cannot uninstall 'llvmlite'. It is a distutils installed project and thus we cannot accurately determine which files belong to it which would lead to only a partial uninstall. (base) mona@mona:~/research/3danimals/SMALViewer$ ipython Python 3.7.6 (default, Jan 8 2020, 19:59:22) Type 'copyright', 'credits' or 'license' for more information IPython 7.16.1 -- An enhanced Interactive Python. Type '?' for help. In [1]: import deeplabcut as dlc In [2]: dlc.__version__ Out[2]: '2.1.8.2'