R version 3.5.1 (2018-07-02) -- "Feather Spray" Copyright (C) 2018 The R Foundation for Statistical Computing Platform: x86_64-apple-darwin13.4.0 (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. Natural language support but running in an English locale R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > install.packages("devtools") also installing the dependencies ‘fs’, ‘git2r’, ‘usethis’ trying URL 'https://cran.rstudio.com/src/contrib/fs_1.2.6.tar.gz' Content type 'application/x-gzip' length 799325 bytes (780 KB) ================================================== downloaded 780 KB trying URL 'https://cran.rstudio.com/src/contrib/git2r_0.24.0.tar.gz' Content type 'application/x-gzip' length 1151420 bytes (1.1 MB) ================================================== downloaded 1.1 MB trying URL 'https://cran.rstudio.com/src/contrib/usethis_1.4.0.tar.gz' Content type 'application/x-gzip' length 325703 bytes (318 KB) ================================================== downloaded 318 KB trying URL 'https://cran.rstudio.com/src/contrib/devtools_2.0.1.tar.gz' Content type 'application/x-gzip' length 388953 bytes (379 KB) ================================================== downloaded 379 KB * installing *source* package ‘fs’ ... ** package ‘fs’ successfully unpacked and MD5 sums checked ** libs x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c error.cc -o error.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c dir.cc -o dir.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c utils.cc -o utils.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c link.cc -o link.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c path.cc -o path.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c file.cc -o file.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c fs.cc -o fs.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c id.cc -o id.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c unix/getmode.cc -o unix/getmode.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c RcppExports.cpp -o RcppExports.o cp -p -f libuv/m4/lt_obsolete.m4 libuv/m4/lt~obsolete.m4 (cd libuv \ && touch aclocal.m4 \ && touch -r aclocal.m4 configure Makefile.in \ && CC="x86_64-apple-darwin13.4.0-clang" CFLAGS="-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -fPIC " AR="x86_64-apple-darwin13.4.0-ar" RANLIB="x86_64-apple-darwin13.4.0-ranlib" LDFLAGS="-Wl,-pie -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,/Users/[user]/anaconda3/envs/renv/lib -L/Users/[user]/anaconda3/envs/renv/lib" ./configure --quiet) configure: error: in `/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmpvsXLnJ/R.INSTALL46766d527b7d/fs/src/libuv': configure: error: C compiler cannot create executables See `config.log' for more details make: *** [Makevars:32: libuv/Makefile] Error 77 ERROR: compilation failed for package ‘fs’ * removing ‘/Users/[user]/anaconda3/envs/renv/lib/R/library/fs’ Warning in install.packages : installation of package ‘fs’ had non-zero exit status * installing *source* package ‘git2r’ ... ** package ‘git2r’ successfully unpacked and MD5 sums checked checking build system type... x86_64-apple-darwin18.2.0 checking host system type... x86_64-apple-darwin18.2.0 checking for gcc... x86_64-apple-darwin13.4.0-clang checking whether the C compiler works... no configure: error: in `/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmpsPwFY0/R.INSTALL477a3f52c772/git2r': configure: error: C compiler cannot create executables See `config.log' for more details ERROR: configuration failed for package ‘git2r’ * removing ‘/Users/[user]/anaconda3/envs/renv/lib/R/library/git2r’ Warning in install.packages : installation of package ‘git2r’ had non-zero exit status ERROR: dependencies ‘fs’, ‘git2r’ are not available for package ‘usethis’ * removing ‘/Users/[user]/anaconda3/envs/renv/lib/R/library/usethis’ Warning in install.packages : installation of package ‘usethis’ had non-zero exit status ERROR: dependencies ‘git2r’, ‘usethis’ are not available for package ‘devtools’ * removing ‘/Users/[user]/anaconda3/envs/renv/lib/R/library/devtools’ Warning in install.packages : installation of package ‘devtools’ had non-zero exit status The downloaded source packages are in ‘/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmpxWxnTx/downloaded_packages’ Updating HTML index of packages in '.Library' Making 'packages.html' ... done > install.packages("git2r") trying URL 'https://cran.rstudio.com/src/contrib/git2r_0.24.0.tar.gz' Content type 'application/x-gzip' length 1151420 bytes (1.1 MB) ================================================== downloaded 1.1 MB * installing *source* package ‘git2r’ ... ** package ‘git2r’ successfully unpacked and MD5 sums checked checking build system type... x86_64-apple-darwin18.2.0 checking host system type... x86_64-apple-darwin18.2.0 checking for gcc... x86_64-apple-darwin13.4.0-clang checking whether the C compiler works... no configure: error: in `/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmppWO1uZ/R.INSTALL484b11b460a4/git2r': configure: error: C compiler cannot create executables See `config.log' for more details ERROR: configuration failed for package ‘git2r’ * removing ‘/Users/[user]/anaconda3/envs/renv/lib/R/library/git2r’ Warning in install.packages : installation of package ‘git2r’ had non-zero exit status The downloaded source packages are in ‘/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmpxWxnTx/downloaded_packages’ Updating HTML index of packages in '.Library' Making 'packages.html' ... done > install.packages("ps") trying URL 'https://cran.rstudio.com/src/contrib/ps_1.3.0.tar.gz' Content type 'application/x-gzip' length 261887 bytes (255 KB) ================================================== downloaded 255 KB * installing *source* package ‘ps’ ... ** package ‘ps’ successfully unpacked and MD5 sums checked ** libs x86_64-apple-darwin13.4.0-clang -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -Wall px.c -o px ld: warning: ignoring file /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/lib/libSystem.tbd, file was built for unsupported file format ( 0x2D 0x2D 0x2D 0x20 0x21 0x74 0x61 0x70 0x69 0x2D 0x74 0x62 0x64 0x2D 0x76 0x33 ) which is not the architecture being linked (x86_64): /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/lib/libSystem.tbd Undefined symbols for architecture x86_64: "___error", referenced from: _echo_from_fd in px-ac601c.o "___stack_chk_fail", referenced from: _cat2 in px-ac601c.o _cat in px-ac601c.o _echo_from_fd in px-ac601c.o _main in px-ac601c.o "___stack_chk_guard", referenced from: _cat2 in px-ac601c.o _cat in px-ac601c.o _echo_from_fd in px-ac601c.o _main in px-ac601c.o "___stderrp", referenced from: _usage in px-ac601c.o _cat2 in px-ac601c.o _cat in px-ac601c.o _write_to_fd in px-ac601c.o _echo_from_fd in px-ac601c.o _main in px-ac601c.o "___stdoutp", referenced from: _echo_from_fd in px-ac601c.o _main in px-ac601c.o "_close", referenced from: _cat in px-ac601c.o "_exit", referenced from: _cat2 in px-ac601c.o _cat in px-ac601c.o "_fflush", referenced from: _echo_from_fd in px-ac601c.o _main in px-ac601c.o "_fprintf", referenced from: _cat2 in px-ac601c.o _cat in px-ac601c.o _write_to_fd in px-ac601c.o _echo_from_fd in px-ac601c.o _main in px-ac601c.o "_fputs", referenced from: _main in px-ac601c.o "_fwrite", referenced from: _usage in px-ac601c.o _main in px-ac601c.o "_getenv", referenced from: _main in px-ac601c.o "_open", referenced from: _cat in px-ac601c.o "_printf", referenced from: _main in px-ac601c.o "_puts", referenced from: _main in px-ac601c.o "_read", referenced from: _cat2 in px-ac601c.o _cat in px-ac601c.o _echo_from_fd in px-ac601c.o "_sleep", referenced from: _main in px-ac601c.o "_sscanf", referenced from: _main in px-ac601c.o "_strcmp", referenced from: _main in px-ac601c.o "_strerror", referenced from: _echo_from_fd in px-ac601c.o "_strlen", referenced from: _write_to_fd in px-ac601c.o _echo_from_fd in px-ac601c.o _main in px-ac601c.o "_usleep", referenced from: _main in px-ac601c.o "_write", referenced from: _cat2 in px-ac601c.o _cat in px-ac601c.o _write_to_fd in px-ac601c.o _echo_from_fd in px-ac601c.o _main in px-ac601c.o (maybe you meant: _write_to_fd) ld: symbol(s) not found for architecture x86_64 clang-4.0: error: linker command failed with exit code 1 (use -v to see invocation) make: *** [Makevars:11: px] Error 1 ERROR: compilation failed for package ‘ps’ * removing ‘/Users/[user]/anaconda3/envs/renv/lib/R/library/ps’ Warning in install.packages : installation of package ‘ps’ had non-zero exit status The downloaded source packages are in ‘/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmpxWxnTx/downloaded_packages’ Updating HTML index of packages in '.Library' Making 'packages.html' ... done > install.packages("fs") trying URL 'https://cran.rstudio.com/src/contrib/fs_1.2.6.tar.gz' Content type 'application/x-gzip' length 799325 bytes (780 KB) ================================================== downloaded 780 KB * installing *source* package ‘fs’ ... ** package ‘fs’ successfully unpacked and MD5 sums checked ** libs x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c error.cc -o error.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c dir.cc -o dir.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c utils.cc -o utils.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c link.cc -o link.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c path.cc -o path.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c file.cc -o file.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c fs.cc -o fs.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c id.cc -o id.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c unix/getmode.cc -o unix/getmode.o x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c RcppExports.cpp -o RcppExports.o cp -p -f libuv/m4/lt_obsolete.m4 libuv/m4/lt~obsolete.m4 (cd libuv \ && touch aclocal.m4 \ && touch -r aclocal.m4 configure Makefile.in \ && CC="x86_64-apple-darwin13.4.0-clang" CFLAGS="-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -fPIC " AR="x86_64-apple-darwin13.4.0-ar" RANLIB="x86_64-apple-darwin13.4.0-ranlib" LDFLAGS="-Wl,-pie -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,/Users/[user]/anaconda3/envs/renv/lib -L/Users/[user]/anaconda3/envs/renv/lib" ./configure --quiet) configure: error: in `/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmpfJtEaE/R.INSTALL491f714651b6/fs/src/libuv': configure: error: C compiler cannot create executables See `config.log' for more details make: *** [Makevars:32: libuv/Makefile] Error 77 ERROR: compilation failed for package ‘fs’ * removing ‘/Users/[user]/anaconda3/envs/renv/lib/R/library/fs’ Warning in install.packages : installation of package ‘fs’ had non-zero exit status The downloaded source packages are in ‘/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmpxWxnTx/downloaded_packages’ Updating HTML index of packages in '.Library' Making 'packages.html' ... done