[root@dfw share]# chimera
Package "DBPuppet" already exists and tool(s) in it will not be loaded
Package "AlignChains" already exists and tool(s) in it will not be loaded
Package "UnitCell" already exists and tool(s) in it will not be loaded
Package "Solvate" already exists and tool(s) in it will not be loaded
Package "MatchMaker" already exists and tool(s) in it will not be loaded
Package "CrystalContacts" already exists and tool(s) in it will not be loaded
Package "Segger" already exists and tool(s) in it will not be loaded
Package "ChangeChainIDs" already exists and tool(s) in it will not be loaded
Package "AddCharge" already exists and tool(s) in it will not be loaded
Package "VolumeSeries" already exists and tool(s) in it will not be loaded
Package "RibbonStyleEditor" already exists and tool(s) in it will not be loaded
Package "ResRenumber" already exists and tool(s) in it will not be loaded
Error while importing Combine from /opt/UCSF/Chimera64-1.10.2/share:
Traceback (most recent call last):
File "/opt/UCSF/Chimera64-1.10.2/share/chimera/extension/base.py", line 349, in _importExtension
__import__(module)
File "/opt/UCSF/Chimera64-1.10.2/share/Combine/ChimeraExtension.py", line 32, in <module>
balloon="Combine molecular models into new model", moleculesOnly=True)
File "/opt/UCSF/Chimera64-1.10.2/share/ModelPanel/base.py", line 40, in addButton
"Button named '%s' already exists" % name
KeyError: "Button named 'copy/combine...' already exists"
Package "ResProp" already exists and tool(s) in it will not be loaded
Package "ShowAttr" already exists and tool(s) in it will not be loaded
Package "MoveSelection" already exists and tool(s) in it will not be loaded
Package "RRDistMaps" already exists and tool(s) in it will not be loaded
Package "BuildStructure" already exists and tool(s) in it will not be loaded
Package "Ilabel" already exists and tool(s) in it will not be loaded
Package "RESTServer" already exists and tool(s) in it will not be loaded
Package "SurfaceCap" already exists and tool(s) in it will not be loaded
Package "VolumePath" already exists and tool(s) in it will not be loaded
Package "SurfaceAreaVolume" already exists and tool(s) in it will not be loaded
Package "ConstrainedMove" already exists and tool(s) in it will not be loaded
Package "Rotamers" already exists and tool(s) in it will not be loaded
Package "PipesAndPlanks" already exists and tool(s) in it will not be loaded
Package "Addions" already exists and tool(s) in it will not be loaded
Package "VolumeMenu" already exists and tool(s) in it will not be loaded
Package "DelphiViewer" already exists and tool(s) in it will not be loaded
Package "Intersurf" already exists and tool(s) in it will not be loaded
Package "apbs" already exists and tool(s) in it will not be loaded
Package "MultiFit" already exists and tool(s) in it will not be loaded
Package "FlattenIcosahedron" already exists and tool(s) in it will not be loaded
Package "NucleicAcids" already exists and tool(s) in it will not be loaded
Package "Movie" already exists and tool(s) in it will not be loaded
Package "MultiScale" already exists and tool(s) in it will not be loaded
Package "Morph" already exists and tool(s) in it will not be loaded
Package "CageBuilder" already exists and tool(s) in it will not be loaded
Package "MultAlignViewer" already exists and tool(s) in it will not be loaded
Package "VolumeStatistics" already exists and tool(s) in it will not be loaded
Package "ScaleBar" already exists and tool(s) in it will not be loaded
Package "PBReader" already exists and tool(s) in it will not be loaded
Package "UndoMove" already exists and tool(s) in it will not be loaded
Package "VolumeEraser" already exists and tool(s) in it will not be loaded
Package "Icosahedron" already exists and tool(s) in it will not be loaded
Package "StructSeqAlign" already exists and tool(s) in it will not be loaded
Package "Aniso" already exists and tool(s) in it will not be loaded
Package "MorphMap" already exists and tool(s) in it will not be loaded
Package "SAXS" already exists and tool(s) in it will not be loaded
Package "FitMap" already exists and tool(s) in it will not be loaded
Package "vina" already exists and tool(s) in it will not be loaded
Package "Animate" already exists and tool(s) in it will not be loaded
Package "VolumeViewer" already exists and tool(s) in it will not be loaded
Package "DockPrep" already exists and tool(s) in it will not be loaded
Package "PickBlobs" already exists and tool(s) in it will not be loaded
Package "ViewDock" already exists and tool(s) in it will not be loaded
Package "WriteDMS" already exists and tool(s) in it will not be loaded
Package "VolumeFilter" already exists and tool(s) in it will not be loaded
Package "Demo" already exists and tool(s) in it will not be loaded
Package "ReadStdin" already exists and tool(s) in it will not be loaded
Package "MeasureVolume" already exists and tool(s) in it will not be loaded
Package "CalcAttr" already exists and tool(s) in it will not be loaded
Package "ModelClip" already exists and tool(s) in it will not be loaded
Package "DetectClash" already exists and tool(s) in it will not be loaded
Package "Accelerators" already exists and tool(s) in it will not be loaded
Package "blastpdb" already exists and tool(s) in it will not be loaded
Package "MinrmsPlot" already exists and tool(s) in it will not be loaded
Package "AtomDensity" already exists and tool(s) in it will not be loaded
Package "EnsembleMatch" already exists and tool(s) in it will not be loaded
Package "Shiny" already exists and tool(s) in it will not be loaded
Package "MMMD" already exists and tool(s) in it will not be loaded
Package "ColorSS" already exists and tool(s) in it will not be loaded
Package "MetalGeom" already exists and tool(s) in it will not be loaded
Package "AddH" already exists and tool(s) in it will not be loaded
Package "MoleculeTransform" already exists and tool(s) in it will not be loaded
Package "HideDust" already exists and tool(s) in it will not be loaded
Package "Notepad" already exists and tool(s) in it will not be loaded
Package "AddAttr" already exists and tool(s) in it will not be loaded
Package "ModelLoops" already exists and tool(s) in it will not be loaded
Package "Benchmark" already exists and tool(s) in it will not be loaded
Error while importing Ramachandran from /opt/UCSF/Chimera64-1.10.2/share:
Traceback (most recent call last):
File "/opt/UCSF/Chimera64-1.10.2/share/chimera/extension/base.py", line 349, in _importExtension
__import__(module)
File "/opt/UCSF/Chimera64-1.10.2/share/Ramachandran/ChimeraExtension.py", line 29, in <module>
ModelPanel.addButton("Ramachandran plot...", emo.modelPanelCB)
File "/opt/UCSF/Chimera64-1.10.2/share/ModelPanel/base.py", line 40, in addButton
"Button named '%s' already exists" % name
KeyError: "Button named 'Ramachandran plot...' already exists"
Package "pdb2pqr" already exists and tool(s) in it will not be loaded
Package "Surfnet" already exists and tool(s) in it will not be loaded
Package "SurfaceColor" already exists and tool(s) in it will not be loaded
Package "ModelPanel" already exists and tool(s) in it will not be loaded
Package "SurfaceZone" already exists and tool(s) in it will not be loaded
Package "ESP" already exists and tool(s) in it will not be loaded
Package "FindHBond" already exists and tool(s) in it will not be loaded
Package "MovieRecorder" already exists and tool(s) in it will not be loaded
Package "SeqAnnotations" already exists and tool(s) in it will not be loaded
Package "Idle" already exists and tool(s) in it will not be loaded
Package "WritePrmtop" already exists and tool(s) in it will not be loaded
Package "ColorZone" already exists and tool(s) in it will not be loaded
Package "StructureDiagram" already exists and tool(s) in it will not be loaded
> start RESTServer
Starting extension 'RESTServer' failed
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