R version 3.5.1 (2018-07-02) -- "Feather Spray"
Copyright (C) 2018 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin13.4.0 (64-bit)
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> install.packages("devtools")
also installing the dependencies ‘fs’, ‘git2r’, ‘usethis’
trying URL 'https://cran.rstudio.com/src/contrib/fs_1.2.6.tar.gz'
Content type 'application/x-gzip' length 799325 bytes (780 KB)
==================================================
downloaded 780 KB
trying URL 'https://cran.rstudio.com/src/contrib/git2r_0.24.0.tar.gz'
Content type 'application/x-gzip' length 1151420 bytes (1.1 MB)
==================================================
downloaded 1.1 MB
trying URL 'https://cran.rstudio.com/src/contrib/usethis_1.4.0.tar.gz'
Content type 'application/x-gzip' length 325703 bytes (318 KB)
==================================================
downloaded 318 KB
trying URL 'https://cran.rstudio.com/src/contrib/devtools_2.0.1.tar.gz'
Content type 'application/x-gzip' length 388953 bytes (379 KB)
==================================================
downloaded 379 KB
* installing *source* package ‘fs’ ...
** package ‘fs’ successfully unpacked and MD5 sums checked
** libs
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c error.cc -o error.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c dir.cc -o dir.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c utils.cc -o utils.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c link.cc -o link.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c path.cc -o path.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c file.cc -o file.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c fs.cc -o fs.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c id.cc -o id.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c unix/getmode.cc -o unix/getmode.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c RcppExports.cpp -o RcppExports.o
cp -p -f libuv/m4/lt_obsolete.m4 libuv/m4/lt~obsolete.m4
(cd libuv \
&& touch aclocal.m4 \
&& touch -r aclocal.m4 configure Makefile.in \
&& CC="x86_64-apple-darwin13.4.0-clang" CFLAGS="-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -fPIC " AR="x86_64-apple-darwin13.4.0-ar" RANLIB="x86_64-apple-darwin13.4.0-ranlib" LDFLAGS="-Wl,-pie -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,/Users/[user]/anaconda3/envs/renv/lib -L/Users/[user]/anaconda3/envs/renv/lib" ./configure --quiet)
configure: error: in `/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmpvsXLnJ/R.INSTALL46766d527b7d/fs/src/libuv':
configure: error: C compiler cannot create executables
See `config.log' for more details
make: *** [Makevars:32: libuv/Makefile] Error 77
ERROR: compilation failed for package ‘fs’
* removing ‘/Users/[user]/anaconda3/envs/renv/lib/R/library/fs’
Warning in install.packages :
installation of package ‘fs’ had non-zero exit status
* installing *source* package ‘git2r’ ...
** package ‘git2r’ successfully unpacked and MD5 sums checked
checking build system type... x86_64-apple-darwin18.2.0
checking host system type... x86_64-apple-darwin18.2.0
checking for gcc... x86_64-apple-darwin13.4.0-clang
checking whether the C compiler works... no
configure: error: in `/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmpsPwFY0/R.INSTALL477a3f52c772/git2r':
configure: error: C compiler cannot create executables
See `config.log' for more details
ERROR: configuration failed for package ‘git2r’
* removing ‘/Users/[user]/anaconda3/envs/renv/lib/R/library/git2r’
Warning in install.packages :
installation of package ‘git2r’ had non-zero exit status
ERROR: dependencies ‘fs’, ‘git2r’ are not available for package ‘usethis’
* removing ‘/Users/[user]/anaconda3/envs/renv/lib/R/library/usethis’
Warning in install.packages :
installation of package ‘usethis’ had non-zero exit status
ERROR: dependencies ‘git2r’, ‘usethis’ are not available for package ‘devtools’
* removing ‘/Users/[user]/anaconda3/envs/renv/lib/R/library/devtools’
Warning in install.packages :
installation of package ‘devtools’ had non-zero exit status
The downloaded source packages are in
‘/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmpxWxnTx/downloaded_packages’
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
> install.packages("git2r")
trying URL 'https://cran.rstudio.com/src/contrib/git2r_0.24.0.tar.gz'
Content type 'application/x-gzip' length 1151420 bytes (1.1 MB)
==================================================
downloaded 1.1 MB
* installing *source* package ‘git2r’ ...
** package ‘git2r’ successfully unpacked and MD5 sums checked
checking build system type... x86_64-apple-darwin18.2.0
checking host system type... x86_64-apple-darwin18.2.0
checking for gcc... x86_64-apple-darwin13.4.0-clang
checking whether the C compiler works... no
configure: error: in `/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmppWO1uZ/R.INSTALL484b11b460a4/git2r':
configure: error: C compiler cannot create executables
See `config.log' for more details
ERROR: configuration failed for package ‘git2r’
* removing ‘/Users/[user]/anaconda3/envs/renv/lib/R/library/git2r’
Warning in install.packages :
installation of package ‘git2r’ had non-zero exit status
The downloaded source packages are in
‘/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmpxWxnTx/downloaded_packages’
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
> install.packages("ps")
trying URL 'https://cran.rstudio.com/src/contrib/ps_1.3.0.tar.gz'
Content type 'application/x-gzip' length 261887 bytes (255 KB)
==================================================
downloaded 255 KB
* installing *source* package ‘ps’ ...
** package ‘ps’ successfully unpacked and MD5 sums checked
** libs
x86_64-apple-darwin13.4.0-clang -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -Wall px.c -o px
ld: warning: ignoring file /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/lib/libSystem.tbd, file was built for unsupported file format ( 0x2D 0x2D 0x2D 0x20 0x21 0x74 0x61 0x70 0x69 0x2D 0x74 0x62 0x64 0x2D 0x76 0x33 ) which is not the architecture being linked (x86_64): /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/lib/libSystem.tbd
Undefined symbols for architecture x86_64:
"___error", referenced from:
_echo_from_fd in px-ac601c.o
"___stack_chk_fail", referenced from:
_cat2 in px-ac601c.o
_cat in px-ac601c.o
_echo_from_fd in px-ac601c.o
_main in px-ac601c.o
"___stack_chk_guard", referenced from:
_cat2 in px-ac601c.o
_cat in px-ac601c.o
_echo_from_fd in px-ac601c.o
_main in px-ac601c.o
"___stderrp", referenced from:
_usage in px-ac601c.o
_cat2 in px-ac601c.o
_cat in px-ac601c.o
_write_to_fd in px-ac601c.o
_echo_from_fd in px-ac601c.o
_main in px-ac601c.o
"___stdoutp", referenced from:
_echo_from_fd in px-ac601c.o
_main in px-ac601c.o
"_close", referenced from:
_cat in px-ac601c.o
"_exit", referenced from:
_cat2 in px-ac601c.o
_cat in px-ac601c.o
"_fflush", referenced from:
_echo_from_fd in px-ac601c.o
_main in px-ac601c.o
"_fprintf", referenced from:
_cat2 in px-ac601c.o
_cat in px-ac601c.o
_write_to_fd in px-ac601c.o
_echo_from_fd in px-ac601c.o
_main in px-ac601c.o
"_fputs", referenced from:
_main in px-ac601c.o
"_fwrite", referenced from:
_usage in px-ac601c.o
_main in px-ac601c.o
"_getenv", referenced from:
_main in px-ac601c.o
"_open", referenced from:
_cat in px-ac601c.o
"_printf", referenced from:
_main in px-ac601c.o
"_puts", referenced from:
_main in px-ac601c.o
"_read", referenced from:
_cat2 in px-ac601c.o
_cat in px-ac601c.o
_echo_from_fd in px-ac601c.o
"_sleep", referenced from:
_main in px-ac601c.o
"_sscanf", referenced from:
_main in px-ac601c.o
"_strcmp", referenced from:
_main in px-ac601c.o
"_strerror", referenced from:
_echo_from_fd in px-ac601c.o
"_strlen", referenced from:
_write_to_fd in px-ac601c.o
_echo_from_fd in px-ac601c.o
_main in px-ac601c.o
"_usleep", referenced from:
_main in px-ac601c.o
"_write", referenced from:
_cat2 in px-ac601c.o
_cat in px-ac601c.o
_write_to_fd in px-ac601c.o
_echo_from_fd in px-ac601c.o
_main in px-ac601c.o
(maybe you meant: _write_to_fd)
ld: symbol(s) not found for architecture x86_64
clang-4.0: error: linker command failed with exit code 1 (use -v to see invocation)
make: *** [Makevars:11: px] Error 1
ERROR: compilation failed for package ‘ps’
* removing ‘/Users/[user]/anaconda3/envs/renv/lib/R/library/ps’
Warning in install.packages :
installation of package ‘ps’ had non-zero exit status
The downloaded source packages are in
‘/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmpxWxnTx/downloaded_packages’
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
> install.packages("fs")
trying URL 'https://cran.rstudio.com/src/contrib/fs_1.2.6.tar.gz'
Content type 'application/x-gzip' length 799325 bytes (780 KB)
==================================================
downloaded 780 KB
* installing *source* package ‘fs’ ...
** package ‘fs’ successfully unpacked and MD5 sums checked
** libs
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c error.cc -o error.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c dir.cc -o dir.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c utils.cc -o utils.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c link.cc -o link.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c path.cc -o path.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c file.cc -o file.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c fs.cc -o fs.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c id.cc -o id.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c unix/getmode.cc -o unix/getmode.o
x86_64-apple-darwin13.4.0-clang++ -I"/Users/[user]/anaconda3/envs/renv/lib/R/include" -DNDEBUG -I./libuv/include -I. -I"/Users/[user]/anaconda3/envs/renv/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/Users/[user]/anaconda3/envs/renv/include -fPIC -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -c RcppExports.cpp -o RcppExports.o
cp -p -f libuv/m4/lt_obsolete.m4 libuv/m4/lt~obsolete.m4
(cd libuv \
&& touch aclocal.m4 \
&& touch -r aclocal.m4 configure Makefile.in \
&& CC="x86_64-apple-darwin13.4.0-clang" CFLAGS="-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -I/Users/[user]/anaconda3/envs/renv/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix -fPIC " AR="x86_64-apple-darwin13.4.0-ar" RANLIB="x86_64-apple-darwin13.4.0-ranlib" LDFLAGS="-Wl,-pie -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,/Users/[user]/anaconda3/envs/renv/lib -L/Users/[user]/anaconda3/envs/renv/lib" ./configure --quiet)
configure: error: in `/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmpfJtEaE/R.INSTALL491f714651b6/fs/src/libuv':
configure: error: C compiler cannot create executables
See `config.log' for more details
make: *** [Makevars:32: libuv/Makefile] Error 77
ERROR: compilation failed for package ‘fs’
* removing ‘/Users/[user]/anaconda3/envs/renv/lib/R/library/fs’
Warning in install.packages :
installation of package ‘fs’ had non-zero exit status
The downloaded source packages are in
‘/private/var/folders/y6/ntnz7dyd2w3f5qvlrpxvpw6m0000gn/T/RtmpxWxnTx/downloaded_packages’
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
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